OSSI-PET: open-access database of simulated [11C]raclopride scans for the inveon preclinical PET scanner: application to the optimization of reconstruction methods for dynamic studies
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Date
2016-07
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Publisher
IEEE
Abstract
A wide range of medical imaging applications benefits from the availability of realistic ground truth data. In the case of positron emission tomography (PET), ground truth data is crucial to validate processing algorithms and assessing their performances. The design of such ground truth data often relies on Monte-Carlo simulation techniques. Since the creation of a large dataset is not trivial both in terms of computing time and realism, we propose the OSSI-PET database containing 350 simulated [ 11 C]Raclopride dynamic scans for rats, created specifically for the Inveon pre-clinical PET scanner. The originality of this database lies on the availability of several groups of scans with controlled biological variations in the striata. Besides, each group consists of a large number of realizations (i.e., noise replicates). We present the construction methodology of this database using rat pharmacokinetic and anatomical models. A first application using the OSSI-PET database is presented. Several commonly used reconstruction techniques were compared in terms of image quality, accuracy and variability of the activity estimates and of the computed kinetic parameters. The results showed that OP-OSEM3D iterative reconstruction method outperformed the other tested methods. Analytical methods such as FBP2D and 3DRP also produced satisfactory results. However, FORE followed by OSEM2D reconstructions should be avoided. Beyond the illustration of the potential of the database, this application will help scientists to understand the different sources of noise and bias that can occur at the different steps in the processing and will be very useful for choosing appropriate reconstruction methods and parameters. © 2016 IEEE
Description
Keywords
Positron computed tomography, Data, Data base management, Images, Algorithms, Simulation, Computers
Citation
Garcia, M.-P., Charil, A., Callaghan, P., Wimberley, C., Busso, F., Grégoire, M.-C., Bardiès, M., & Reilhac, A. (2016). OSSI-PET: open-access database of simulated [11C]raclopride scans for the inveon preclinical PET scanner: application to the optimization of reconstruction methods for dynamic studies. IEEE Transactions on Medical Imaging, 35(7), 1696-1706. doi:10.1109/TMI.2016.2526086